Site rne
- Name: rne
- Type: Gene
- Synonyms
ams pre-'91 and by McDowall et al.'93 b1084 MG1655 locus tag hmp1 - Mnemonic: RNase E
- Left End Point: 24.58
- Right End Point: 24.65
- Products:
ribonuclease E RNase E - Direction: <
- Priority: 1
- 1 Alleles of This Gene
rne-3071(ts) - External Database Links:
Host Site Page Links EcoGene.org EG10859 EcoliWiki rne - Comment:
- Shown to be allele of ams. See Prods and Babitzke ref.
- References:
- Ono, M., M. Kuwano 1980. Chromosomal location of a gene for chemical longevity of messenger ribonucleic acid in a temperature-sensitive mutant of Escherichia coli. J.Bacteriol. 142:325-326
- Misra, T.K., D. Apirion 1980. Gene rne affects the structure of the ribonucleic acid-processing enzyme ribonuclease E of Escherichia coli. J.Bacteriol. 142:359-361
- Ray, A., D. Apirion 1982. Characterization of DNA from the rne gene of Escherichia coli: uniqueness of the rne DNA. Biochem.Biophys.Res.Commun. 107:1361-1367
- Chanda, P.K., M. Ono, M. Kuwano, H.-F. Kung 1985. Cloning, sequence analysis, and expression of alteration of the mRNA stability gene (ams^+) of Escherichia coli. J.Bacteriol. 161:446-449
- Claverie-Martin, F., M.R. Diaz-Torres, S.D. Yancey, S.R. Kushner 1989. Cloning of the altered mRNA stability (ams) gene of Escherichia coli K-12. J.Bacteriol. 171:5479-5486
- Mudd, E.A., H.M. Krisch, C.F. Higgins 1990. RNase E, an endoribonuclease, has a general role in the chemical decay of Escherichia coli mRNA: evidence that rne and ams are the same genetic locus. Mol.Microbiol. 4:2127-2135
- Mackie, G.A. 1991. Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro. J.Bacteriol. 173:2488-2497
- Chauhan, A.K., A. Miczak, L. Taraseviciene, D. Apirion 1991. Sequencing and expression of the rne gene of Escherichia coli. Nucleic Acids Res. 19:125-129
- Babitzke, P., S.R. Kushner 1991. The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli. Proc.Natl.Acad.Sci.USA 88:1-5
- Melefors, O., A. von Gabain 1991. Genetic studies of cleavage-initiated mRNA decay and processing of ribosomal 9S RNA show that the Escherichia coli ams and rne loci are the same. Mol.Microbiol. 5:857-864
- Taraseviciene, L., A. Miczak, D. Apirion 1991. The gene specifying RNase E (rne) and a gene affecting mRNA stability (ams) are the same gene. Mol.Microbiol. 5:851-855
- Casaregola, S., A. Jacq, D. Laoudj, G. McGurk, S. Margarson, M. Tempete, V. Norris, I.B. Holland 1992. Cloning and analysis of the entire Escherichia coli ams gene.ams is identical to hmp1 and encodes a 114 kDa protein that migrates as a 180 kDa protei
- Cormack, R.S., J.L. Genereaux, G.A. Mackie 1993. RNase E activity is conferred by a single polypeptide: overexpression, purification, and properties of the ams/rne/hmp1 gene product. Proc.Natl.Acad.Sci.USA 90:9006-9010
- McDowall, KJ, RG Hernandez, S Lin-Chao, SN Cohen 1993. The ams-1 and rne-3071 temperature-sensitive mutations in the ams gene are in close proximity to each other and cause substitutions within a domain that resembles a product of the Escherichia coli mre locus. J. Bacteriol. 175(13):4245-9.
- Taraseviciene, L., G.R. Bjork, B.E. Uhlin 1995. Evidence for an RNA binding region in the Escherichia coli processing endoribonuclease RNase E. J.Biol.Chem. 270:26391-26398
- Lundberg, U., S. Altman 1995. Processing of the precursor to the catalytic RNA subunit of RNase P from Escherichia coli. RNA 1:327-334
- Jain, C., J.G. Belasco 1995. Autoregulation of RNase E synthesis in Escherichia coli. Nucleic Acids Symp.Ser. 114:85-88
- Miczak, A., V.R. Kaberdin, C.L. Wei, S. Lin-Chao 1996. Proteins associated with RNase E in a multicomponent ribonucleolytic complex. Proc.Natl.Acad.Sci.USA 93:3865-3869
- Cam, K., G. Rome, H.M. Krisch, J.P. Bouche 1996. RNase E processing of essential cell division genes mRNA in Escherichia coli. Nucleic Acids Res. 24:3065-3070
- Barlow, T., M. Berkmen, D. Georgellis, L. Bayr, S. Arvidson, A. von Gabain 1998. RNase E, the major player in mRNA degradation, is down-regulated in Escherichia coli during a transient growth retardation (diauxic lag). Biol.Chem. 379:33-38
- Bessarab, D.A., V.R. Kaberdin, C.L. Wei, G.G. Liou, S. Lin-Chao 1998. RNA components of Escherichia coli degradosome: evidence for rRNA decay. Proc.Natl.Acad.Sci.USA 95:3157-3161
- Huang, H., J. Liao, S.N. Cohen 1998. Poly(A)- and poly(U)-specific RNA 3' tail shortening by E.coli ribonuclease E. Nature 391:99-102
- Ow, M.C., Q. Liu, B.K. Mohanty, M.E. Andrew, V.F. Maples, S.R. Kushner 2002. RNase E levels in Escherichia coli are controlled by a complex regulatory system that involves transcription of the rne gene from three promoters. Molecular Microbiology 43:15
- Hanawa-Suetsugu, K., M. Takagi, H. Inokuchi, H. Himeno, A. Muto 2002. SmpB functions in various steps of trans-translation. Nucleic Acids Res. 30:1620-1629